Grants by Program

ARC - (N/A) Academy of Finland (Suomen Akatemia) - Strategic Funds Alexander von Humboldt-Foundation - postdoctoral fellowships Alfred P. Sloan Foundation - (N/A) Alfred P. Sloan Foundation - Open Research Fund Alfred P. Sloan Foundation - Technology American Philosophical Society - Lewis and Clark Fund American Society of Naturalists - (N/A) Arkansas Audubon Society - Student Research Awards Australian Biological Resources Study - Research Grant Australian Research Council (ARC) - Discovery Project Grant Australian Research Council - Discovery Grant Austrian Science Fund (FWF) - (N/A) BBSRC - Responsive Mode Application BBSRC - Tools and Resources Development Fund Application Belgian Science Policy Office (BELSPO) - Belgian Research Action through Interdisciplinary Networks (BRAIN) CIHR - (N/A) Canadian Institutes of Health Research (CIHR) - annual competition for postdoctoral fellowships Chan Zuckerberg Initiative - Collaborative Computational Tools for the Human Cell Atlas Cystic Fibrosis Canada - (N/A) Czech Science Foundation - (N/A) DFG - (N/A) DFG - PostDoc proposal DFG - Wis­senschaftliche Mono­gra­phien und mono­graphis­che Se­rien im Open Ac­cess DOE - Computational Science Graduate Fellowship Danish Center for Supercomputing - (N/A) Danish National Science Foundation - (N/A) Danish National Science Foundation - Chemical Physics Danish National Science Foundation - FNU Dutch Fulbright Center - Fulbright Scholarships EMBO - Young Investigator Programme ERC - ADG Advanced Grant EU - Marie Curie Eastern Bird Banding Assocation - Student Research Grant Ecological Society of America - Forest Shreve Research Award Egypt Excellence Scholarships - PhD Project proposal Endangered Language Documentation Project - Individual Postdoctoral Fellowship European Commission - Horizon 2020 e-Infrastructures for virtual research environments (VRE) European Commission - Marie Skłodowska-Curie Individual Fellowship European Community (Framework 7) - Marie Curie Intra European Fellowship European Research Commission (ERC-StG-2014) - (N/A) European Union - Framework Programme Horizon 2020, COST Actions European Union - Horizon 2020 Marie Sklodowska-Curie grant BIG4 PhD Project proposal European Union - Marie Skłodowska-Curie Individual Fellowship Fondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT) - Postdoctoral Grant Garden Club of America - The Frances M. Peacock Scholarship for Native Bird Habitat Heinrich Heine University Düsseldorf - eLearning Support Fund IDRC - (N/A) Institute of Museum and Library Services (US) - (N/A) LTER - Training Working Groups Proposal Leakey Foundation - (N/A) Moore Foundation - Data Driven Discovery Investigators Moore Foundation - Marine Microbiology Initiative Multiple - (N/A) NASA - Predoctoral Graduate Fellowship NERC - (N/A) NERC - New Investigator Award NIH - (N/A) NIH - F31 NIH - National Institute of Diabetes and Digestive and Kidney Diseases NIH - National Institute of Diabetes and Digestive and Kidney Diseases MNORC small grant NIH - R01 NIH - R25 NSERC - (N/A) NSF - (N/A) NSF - ABI NSF - ACI-CYBERINFRASTRUCTURE, EAGER NSF - AVATOL NSF - Advances in Biological Informatics (ABI) NSF - BIGDATA NSF - CAREER NSF - Cultural Anthropology NSF - Cyberinfrastructure NSF - DDIG NSF - Dissertation Improvement Grant (DDIG) NSF - Division of Ocean Sciences NSF - Doctoral Dissertation Improvement Grant NSF - Dynamics of Coupled Human and Natural Systems NSF - EAPSI NSF - EAR Postdoctoral Fellowship NSF - Ecology and Evolution of Infectious Diseases (EEID) NSF - Graduate Research Fellowship Program NSF - MCB NSF - Nordic Research Opportunity NSF - PD 03-7252 (1/15/2007) BCS - PERCEPTION, ACTION & COGNITION NSF - Plant Genome NSF - Plant Genome Research NSF - Population & Community Ecology NSF - Postdoctoral Fellowship in Biology NSF - Research Starter Grant NSF - SBE Office of Multidisciplinary Activities (SMA) NWO - Open Programme for Earth and Life Sciences NWO - PhD Fellowship NWO - Postdoctoral Fellowship NWO - VICI National Center for Ecological Analysis and Synthesis - Working Group National Health and Medical Research Foundation - Senior Research Fellowship National Institutes of Health (US) - Big Data to Knowledge (BD2K) Advancing Biomedical Science Using Crowdsourcing and Interactive Digital Media (UH2) National Institutes of Health (US) - Big Data to Knowledge (BD2K) Advancing Biomedical Science Using Crowdsourcing and Interactive Digital Media (UH2) (RFA-CA-15-006) National Institutes of Health (US) - F31 National Institutes of Health (US) - K01 National Institutes of Health (US) - K08 National Institutes of Health (US) - PAR-09-219: Exploratory Innovations in Biomedical Computational Science and Technology (R21) National Institutes of Health (US) - PAR-14-331 Global Brain and Nervous System Disorders Research Across the Lifespan (R21) National Institutes of Health (US) - R01 National Institutes of Health (US) - R03 National Institutes of Health (US) - R15 National Institutes of Health (US) - R21 National Institutes of Health (US) - R21 (PA-10-069) National Institutes of Health (US) - R21/R33 National Institutes of Health (US) - R41, R42, R43, R44 National Institutes of Health (US) - Ruth L. Kirschstein National Research Service Award (NRSA) Individual Predoctoral Fellowship National Institutes of Health (US) - unsolicited R21 National Institutes of Health - NIGMS National Institutes of Health, Department of Health and Human Services (US) - IR-ORI-16-001 by the Office of Research Integrity Netherlands eScience Center (NLeSC) - Accelerating Scientific Discovery (ASDI) New Széchenyi Plan (ÚSZT) [Hungarian] - National Excellence Program Prairie Biotic Research, Inc. - (N/A) Shuttleworth Foundation - Shuttleworth Foundation Fellowship Program Texas Higher Education Coordinating Board - Norman Hackerman Advanced Research Program The Hungarian Diaspora Council (Nemzeti Regiszter) - Mikes Kelemen Program The Wellcome Trust - The Open Science Prize Tzu Chi University College of Medicine, Taiwan - Cardiovascular Research Tzuchi University College of Medicine - PhD Project proposal USDA - (N/A) USDA - NIFA USGS - (N/A) Universidad Nacional de General Sarmiento - (N/A) University of California Natural Reserve System - Mildred E. Mathias Graduate Student Research Grant Program University of Melbourne - (N/A) University of Melbourne and FAPESP - FAPESP/UOM SPRINT grant WWF - Kathryn Fuller Doctoral Fellowship Wellcome Trust - Open Research Fund Wenner-Gren Foundation - Dissertation Fieldwork Grant

ARC - (N/A)

• Evolutionary dynamics of the algae: Understanding adaptive potential under environmental change Heroen Verbruggen, 2012, unfunded
• Probing key innovations with next generation sequencing Heroen Verbruggen, , unfunded

Academy of Finland (Suomen Akatemia) - Strategic Funds

• Unicorn–Open science for assessing environmental state, human health and regional economy Pekka Neittaanmäki, 2015, unfunded

Alexander von Humboldt-Foundation - postdoctoral fellowships

• Software quality information needs Daniel Graziotin, 2016, funded

Alfred P. Sloan Foundation - (N/A)

• Improving the visibility of scholarly software work James Howison, 2016, funded

Alfred P. Sloan Foundation - Open Research Fund

• ImpactStory grant proposal Jason Priem and Heather Piwowar, 2013, funded

Alfred P. Sloan Foundation - Technology

• To support continued development of Manubot, a git-native authoring tool for scientific manuscripts Daniel S. Himmelstein, 2018, funded

American Philosophical Society - Lewis and Clark Fund

• Do Cultivated Sunflowers Homogenize the Pollinator Communities of, and Selection on, Wild Sunflowers? Scott Chamberlain, 2009, unfunded

American Society of Naturalists - (N/A)

• How do crop-mediated changes in mutualist and antagonist communities affect selection on floral and defense traits? Scott Chamberlain, , unfunded

Arkansas Audubon Society - Student Research Awards

• Migratory Stopover Timing, Survival and Habitat Use of Fall Migrating Sora in Managed Wetlands in Missouri Auriel M.V. Fournier, 2014, funded

Australian Biological Resources Study - Research Grant

• Molecular systematics of the siphonous green algae Heroen Verbruggen, 2013, funded

Australian Research Council (ARC) - Discovery Project Grant

• Can video improve grant review quality and lead to more reliable ranking? Michael Doran, 2016, unfunded

Australian Research Council - Discovery Grant

• Genome dynamics following plastid endosymbiosis Heroen Verbruggen, 2015, funded

Austrian Science Fund (FWF) - (N/A)

• Heteroatom quantum corrals and nanoplasmonics in graphene (HeQuCoG) Toma Susi, 2015, funded

BBSRC - Responsive Mode Application

• Population Genomics of Retrotransposons in Drosophila Casey Bergman, 2007, unfunded

BBSRC - Tools and Resources Development Fund Application

• pubmed2ensembl: a resource for linking biological literature to genome sequences Casey Bergman, 2008, funded

Belgian Science Policy Office (BELSPO) - Belgian Research Action through Interdisciplinary Networks (BRAIN)

• Tracking Invasive Alien Species (TrIAS): Building a data-driven framework to inform policy Sonia Vanderhoeven, 2017, funded

CIHR - (N/A)

• Regulation of CRP-S promoters in H. influenzae and E. coli Rosie Redfield, 2007, funded
• Predicting gene transfer in respiratory bacteria Rosie Redfield, 2012, unknown

Canadian Institutes of Health Research (CIHR) - annual competition for postdoctoral fellowships

• Widening the circle of care: An arts-based, participatory dialogue with stakeholders on cancer care for First Nations, Inuit, and Métis peoples in Ontario, Canada Chad Hammond, 2016, funded

Chan Zuckerberg Initiative - Collaborative Computational Tools for the Human Cell Atlas

• Genome-wide hypothesis generation for single-cell expression via latent spaces of deep neural networks Casey S. Greene, 2017, TBD

Cystic Fibrosis Canada - (N/A)

• The Haemophilus DNA Magnet Rosie Redfield, 2012, unknown

Czech Science Foundation - (N/A)

• Uncovering Regulatory Interactions in Cells with Bayesian Statistics Martin Modrák, 2018, unfunded

DFG - (N/A)

• Continuous and Focused Developer Feedback on Software Quality (CoFoDeF) Stefan Wagner, 2015,

DFG - PostDoc proposal

• Benefits and costs of aphid phenological bet-hedging strategies Jens Joschinski, 2016,

DFG - Wis­senschaftliche Mono­gra­phien und mono­graphis­che Se­rien im Open Ac­cess

• Language Science Press: A Publication Model for Open-Access Books in Linguistics Stefan Müller and Martin Haspelmath, 2013, funded

DOE - Computational Science Graduate Fellowship

• A latent variable modeling approach to multi-taxa prediction Kari Norman, 2016, funded

Danish Center for Supercomputing - (N/A)

• Protein Design Using Quantum Mechanics Jan Jensen, 2010, funded

Danish National Science Foundation - (N/A)

• Computational Design of Stable Enzymes Jan Jensen, 2008, funded

Danish National Science Foundation - Chemical Physics

• High Througput pKa Prediction Using Semi Empirical Methods Jan Jensen, 2015, funded

Danish National Science Foundation - FNU

• Computational Prediction and Validation of Protein Structure and Function in Protein Engineering and Rational Drug Design Jan Jensen, 2006, funded

Dutch Fulbright Center - Fulbright Scholarships

• Problematic trial detection in ClinicalTrials.gov Chris HJ Hartgerink, 2015,

EMBO - Young Investigator Programme

• EMBO Young Investigator Programme Casey Bergman, 2008, unfunded

ERC - ADG Advanced Grant

• IMMUNENESIS Detlef Weigel, 2013, funded

EU - Marie Curie

• Modeling pH-Dependence in Drug Design Jan Jensen, 2006, funded

Eastern Bird Banding Assocation - Student Research Grant

• USING STABLE ISOTOPES & eBIRD TO ASSESS MIGRATORY CONNECTIVITY OF FALL MIGRATING RAILS Auriel M.V. Fournier, 2015, unfunded

Ecological Society of America - Forest Shreve Research Award

• Mechanisms for the Structure of Sonoran Desert Ant-Plant Mutualistic Communities Scott Chamberlain, , unfunded

Egypt Excellence Scholarships - PhD Project proposal

• Physics of Laser in Contemporary Visual Arts: the research protocol Diaa Ahmed Mohamed Ahmedien, 2013, funded

Endangered Language Documentation Project - Individual Postdoctoral Fellowship

• Documenting and describing Kagate, an endangered Tibeto-Burman language of Nepal Lauren Gawne, 2014, funded

European Commission - Horizon 2020 e-Infrastructures for virtual research environments (VRE)

• Enabling Open Science: Wikidata for Research (Wiki4R) Daniel Mietchen, 2015, unfunded

European Commission - Marie Skłodowska-Curie Individual Fellowship

• FRAXIFAM: Reconstructing gene family evolution in the ash genus (Fraxinus) Endymion Cooper, 2015, funded

European Community (Framework 7) - Marie Curie Intra European Fellowship

• Is there a limit to biotic diversification? Insights from stochastic models of speciation and extinction Olivier Missa, 2013, funded

European Research Commission (ERC-StG-2014) - (N/A)

• Strategic Predictions for Quantum Field Theories John Joseph M. Carrasco, 2014, funded

European Union - Framework Programme Horizon 2020, COST Actions

• Advancing marine conservation in European and contiguous seas with the MarCons Action Stelios Katsanevakis, 2015, funded
• DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe Florian Leese, 2016, funded
• Unifying European Biodiversity Informatics (BioUnify) Vince Smith, 2014, unfunded
• PESFOR-W: Improving the design and environmental effectiveness of woodlands for water Payments for Ecosystem Services Gregory Valatin, 2016, funded

European Union - Horizon 2020 Marie Sklodowska-Curie grant BIG4 PhD Project proposal

• The Open Biodiversity Knowledge Management System in Scholarly Publishing Viktor Senderov, 2015, funded

European Union - Marie Skłodowska-Curie Individual Fellowship

• TimeAdapt: Tracking Genetic Adaptation of Populations Using Time-Series Genomic Data Miguel Navascués, 2017, funded

Fondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT) - Postdoctoral Grant

• Applying machine learning and image feature extraction techniques to the problem of cerebral aneurysm rupture Steren Chabert, 2017,

Garden Club of America - The Frances M. Peacock Scholarship for Native Bird Habitat

• THE USE OF STABLE ISOTOPES, eBIRD AND SPECIES DISTRIBUTION MODELS TO ASSESS MIGRATORY CONNECTIVITY OF FALL MIGRATING RAILS Auriel M.V. Fournier, 2015, funded

Heinrich Heine University Düsseldorf - eLearning Support Fund

• Data Intensive Science Nicolas Schmelling, 2017, unfunded

IDRC - (N/A)

• Exploring the opportunities and challenges of implementing open research strategies within development institutions Cameron Neylon and Leslie Chan, 2015, funded

Institute of Museum and Library Services (US) - (N/A)

• Cobweb: A Collaborative Collection Development Platform for Web Archiving Stephen Abrams, 2016, funded

LTER - Training Working Groups Proposal

• Data Management and Computational Skills Training for LTER Scientists Tracy Teal, Ethan White, and Greg Wilson, 2012, unfunded

Leakey Foundation - (N/A)

• Fossil hominin footprints and the dynamics of footprint formation Kevin G. Hatala, 2012, funded

Moore Foundation - Data Driven Discovery Investigators

• Moore Investigator in Data Driven Discovery C. Titus Brown, 2014, funded
• Moore Investigator in Data Driven Discovery Ethan P. White, 2014, funded

Moore Foundation - Marine Microbiology Initiative

• Marine metagenomics C. Titus Brown, 2012, funded

Multiple - (N/A)

• Making sense of cancer data: Implications for personalized therapy and cancer biology B. Arman Aksoy, 2014,

NASA - Predoctoral Graduate Fellowship

• Fuelwood, Savannas, and Climate Change: Integrating Modeling, Field Experimentation, and Optical and Radar Remote Sensing Andrew Tredennick, 2011, funded

NERC - (N/A)

• Dark taxa: Preparing for a post-taxonomic future Rod Page, 2011,

NERC - New Investigator Award

• Testing the impact of host demography on transposable element dynamics in Drosophila Casey Bergman, 2008, funded

NIH - (N/A)

• Cartwheel: Tools for Regulatory Genomics C. Titus Brown, 2007, unfunded

NIH - F31

• Computational Analysis of Subclonal Evolution in Chronic Lymphocytic Leukemia Jean Fan, 2015, funded

NIH - National Institute of Diabetes and Digestive and Kidney Diseases

• Regulation of Lipid Storage by mTORC1 David Bridges, 2016, funded

NIH - National Institute of Diabetes and Digestive and Kidney Diseases MNORC small grant

• Tissue Specific Inhibition of Diet-Induced Thermogenesis David Bridges, 2016, funded

NIH - R01

• Gene Wiki: Expanding the ecosystem of community intelligence resources Andrew Su, 2014, funded
• Gene Wiki: A community-maintained knowledge base of biomedical information Andrew Su, 2017, funded

NIH - R25

• A short course in analyzing next-generation sequencing data C. Titus Brown, 2010, funded

NSERC - (N/A)

• Bacterial DNA uptake and the evolution of sex Rosie Redfield, 2012, unknown

NSF - (N/A)

• A Digital Repository for Preservation and Sharing of Data Underlying Published Works in Evolutionary Biology Todd Vision, 2008, funded
• Sustainable and Scalable Infrastructure for the Publication of Data Todd Vision, 2012, funded

NSF - ABI

• Towards a comprehensive, community-owned and sustainable repository of reusable phylogenetic knowledge Hilmar Lapp, William Piel, Michael Donoghue, Mark Westneat, Matt Bietz, Karen Cranston, David Maddison, 2010, unfunded

NSF - ACI-CYBERINFRASTRUCTURE, EAGER

• Investigating the value of automatically-gathered software impact data Heather Piwowar and Jason Priem, 2013, funded

NSF - AVATOL

• Automated and community synthesis of the tree of life Karen Cranston, 2011, funded

NSF - Advances in Biological Informatics (ABI)

• Controlling the taxonomic variable: Taxonomic concept resolution for a southeastern United States herbarium portal Nico Franz, 2016,

NSF - BIGDATA

• Low-memory Streaming Prefilters for Biological Sequencing Data C. Titus Brown, 2012, funded

NSF - CAREER

• CAREER: Scaling and Improving de Bruijn graph assembly C. Titus Brown, 2011, unfunded
• CAREER: Assembling Extremely Large Metagenomes C. Titus Brown, 2012, unfunded
• CAREER: Rapid evolution of an invasive plant: the role of microbial interactions Katrina M. Dlugosch, 2017, funded
• CAREER: Citizens, Conservation, and Climate: Research and Education for Climate Literacy in Managed Landscapes Alejandro N. Flores, 2014, funded
• CAREER: Pastoral Management of Open Access: The Emergence of a Complex Adaptive System Mark Moritz, 2008, funded
• CAREER: Advancing Macroecology Using Informatics and Entropy Maximization Ethan P. White, 2010, funded

NSF - Cultural Anthropology

• Dissertation research: The market and the moral economy of Fulani pastoralists in northern Cameroon Mark Moritz, 1999, funded
• RAPID: Studying the Effects of Disturbance in a Complex Socioecological System Mark Moritz, 2015, funded

NSF - Cyberinfrastructure

• Materials and Workshops for Cyberinfrastructure Education in Biology C. Titus Brown, 2012, funded

NSF - DDIG

• Mechanisms for the Structure of Sonoran Desert Ant-Plant Mutualistic Communities Scott Chamberlain, , unfunded

NSF - Dissertation Improvement Grant (DDIG)

• The impact of sources of inspiration on the genesis of innovative ideas Joel Chan, 2014, funded
• Evolution under simulated climate change in response to trophic shifts Ted Harte, 2008, funded
• Doctoral Dissertation Improvement: Fossil footprints and the dynamics of footprint formation: Implications for the evolution of human gait Kevin G. Hatala, 2012, funded

NSF - Division of Ocean Sciences

• Collaborative Research: Submesoscale-Resolving Large Eddy Simulations Using Reduced Biogeochemical Models Peter E. Hamlington, Nicole S. Lovenduski, Kyle E. Niemeyer, 2019, funded

NSF - Doctoral Dissertation Improvement Grant

• Use of morphological data for estimation of phylogenetic trees April M. Wright, 2013, funded
• Coevolution and co-divergence in a classical obligate mutualism between Joshua tree (*Yucca brevifolia*) and its pollinators (*Tegeticula* spp.) Jeremy B. Yoder, 2008, funded

NSF - Dynamics of Coupled Human and Natural Systems

• CNH: Exploring social, ecological, and hydrological regime shifts in the Logone Floodplain, Cameroon Mark Moritz, Michael Durand, Ian Hamilton, Bryan Mark, Ningchuan Xiao, 2012, funded

NSF - EAPSI

• Timing is everything: Identifying peak Rallidae call rate in southeast Australia Auriel M.V. Fournier, 2015, unfunded

NSF - EAR Postdoctoral Fellowship

• Impacts of Novel Stormwater Management on Groundwater Recharge Aditi S Bhaskar, 2013, funded

NSF - Ecology and Evolution of Infectious Diseases (EEID)

• EEID: Livestock Movements and Disease Epidemiology in the Chad Basin: Modeling Risks for Animals and Humans Rebecca Garabed (PI), Song Liang, Mark Moritz, and Ningshuan Xiao, 2009, funded

NSF - Graduate Research Fellowship Program

• NSF Graduate Research Fellowship Kevin Bird, 2016, funded
• The role of diet, physiology, and behavior in thermoregulation and population growth of the invasive monk parakeet (Myiopsitta monachus) Kevin R. Burgio, 2010, funded
• Do species-environment feedbacks lead to multiple trajectories of ecosystem change? Adam Clark, 2011, funded
• NSF Graduate Research Fellowship Danielle H. Drabeck, 2013, unfunded
• Elucidating local archaic ancestry using machine learning Arun Durvasula, 2018, funded
• Incorporating time into the study of anthropogenic land use and disease Michelle V. Evans, 2014, not funded
• Vector dynamics and disease transmission across an urban gradient Michelle V. Evans, 2015, funded
• A Bayesian Network Approach for Assessing Factors in Complex Disease Etiology Jean Fan, 2013, funded
• Microbiome and stress: examining host-microbe responses in ascidians following acute low salinity exposure Lisa K. Johnson, 2016, not funded - honorable mention
• GRFP Application Daniel J. Lurie, 2013, funded
• A latent variable modeling approach to multi-taxa prediction Kari Norman, 2016, funded
• Forecasting regime shifts in ecosystems David Seekell, 2010, funded
• The Biological Constraints of Learning in Fathead Minnows (Pimphales promelas) Delia Shelton, 2010, funded
• How do nomadic species and their pathogens respond to changing resource distributions? Claire S. Teitelbaum, 2016, funded
• NSF Graduate Research Fellowship Sam Zorowitz, 2018, funded

NSF - MCB

• The Prediction and Interpretation of Protein pKa’s Using QM/MM Jan Jensen, 2002, funded
• Prediction and Interpretation of Protein pKa’s Using QM/MM Jan Jensen, 2006, funded

NSF - Nordic Research Opportunity

• Conceptual and Methodological Advancements for Global-Scale Limnological Research David Seekell, 2011, funded

NSF - PD 03-7252 (1/15/2007) BCS - PERCEPTION, ACTION & COGNITION

• Data-Visual Relationships to Subject Performance and Eye Movements Arno Klein, 2016, unfunded

NSF - Plant Genome

• Functional Genomics of Maize Centromeres Kelly Dawe, Jeff Ross-Ibarra, James Birchler, Jiming Jiang, Wayne Parrott, Gernot Presting, 2009, funded

NSF - Plant Genome Research

• The genetics of highland adaptation in maize Jeff Ross-Ibarra, 2015, funded

NSF - Population & Community Ecology

• Reversing long-term experiments to understand regime shifts Morgan Ernest, 2013, funded

NSF - Postdoctoral Fellowship in Biology

• Developing groups and their response to anthropogenic change Delia Shelton, 2016, funded
• Dynamic macroecology: Globally assessing body size diversity response to environmental change Sarah Supp, 2014, funded
• Diversity-stability relationships and coexistence: new theory and empirical tests Andrew Tredennick, 2014, funded
• Broad-scale patterns of the distribution of body sizes of individuals in ecological communities Ethan P. White, 2005, funded
• Fossilized Birth-Death Dating in Formicidae April M. Wright, 2016, funded

NSF - Research Starter Grant

• Understanding multimodality in animal size distributions Ethan P. White, 2008, funded

NSF - SBE Office of Multidisciplinary Activities (SMA)

• Computer Science meets Anthropology: a novel approach for reconstructing locomotion from fossil human footprints Kevin G. Hatala, 2014, funded

NWO - Open Programme for Earth and Life Sciences

• Has frugivory influenced the macroecology and diversification of a tropical keystone plant family? W. Daniel Kissling, 2016, funded

NWO - PhD Fellowship

• PhD Fellowship Menno Schilthuizen, 2009, funded
• Evo-devo of chirality in insect genitalia Menno Schilthuizen, 2011, unfunded
• Sexual selection and the evolution of coiling direction in snails (Mollusca: Gastropoda) Menno Schilthuizen, 2014, unfunded

NWO - Postdoctoral Fellowship

• Development and application of Massive Barcode-based Biodiversity Assessment (MBBA); a novel method for rapid estimation of species diversity Menno Schilthuizen, 2007, unfunded
• Determinants of species diversity at 14 spatial scales in tropical microsnails from endangered limestone habitats Menno Schilthuizen, 2010, funded

NWO - VICI

• Exotic forms of matter Patrick Koppenburg, 2017, unfunded

National Center for Ecological Analysis and Synthesis - Working Group

• Evolution under simulated climate change in response to trophic shifts Ted Harte and Scott Chamberlain, 2008, unfunded

National Health and Medical Research Foundation - Senior Research Fellowship

• Meta-research: Using research to increase the value of health and medical research Adrian G. Barnett, 2016, funded

National Institutes of Health (US) - Big Data to Knowledge (BD2K) Advancing Biomedical Science Using Crowdsourcing and Interactive Digital Media (UH2)

• A game for crowdsourcing the segmentation of BigBrain data Arno Klein, 2016, unfunded

National Institutes of Health (US) - Big Data to Knowledge (BD2K) Advancing Biomedical Science Using Crowdsourcing and Interactive Digital Media (UH2) (RFA-CA-15-006)

• Crowdsourcing voice editing and quality assessment of data collected from the largest mobile phone-based research study of Parkinson disease Arno Klein, 2016, unfunded

National Institutes of Health (US) - F31

• The role of wcjE disruption in pneumococcal serotype 11A humoral escape Juan Calix, 2010, funded
• Characterization of Antibody-Dependent Cellular Cytotoxicity in HIV Infection Adjoa R. Smalls-Mantey, 2011, funded

National Institutes of Health (US) - K01

• Metabolomics Evaluation of the Etiology of Pneumonia Lilliam Ambroggio, 2016, funded
• The HIV Care Continuum and Health Policy: Changes through Context and Geography Peter Rebeiro, 2017, funded

National Institutes of Health (US) - K08

• Antibody Mediated Mechanisms of Immune Modulation in Tuberculosis Lenette Lu, 2016, funded
• Defining clinical and sterile immunity to Plasmodium falciparum infection using systems biology approaches Tuan Manh Tran, 2016, funded

National Institutes of Health (US) - PAR-09-219: Exploratory Innovations in Biomedical Computational Science and Technology (R21)

• Brain Graph Interface Arno Klein, 2016, unfunded

National Institutes of Health (US) - PAR-14-331 Global Brain and Nervous System Disorders Research Across the Lifespan (R21)

• Visual Parkinson’s Disease Rating Scale: A Universal Iconic Questionnaire for Epidemiological Studies in India Arno Klein, 2016, unfunded

National Institutes of Health (US) - R01

• Inflammatory cascades disrupt Treg function through epigenetic mechanisms William Faubion, 2015, funded
• Hair Extensions: Using Hair Levels to Interpret Adherence, Effectiveness and Pharmacokinetics with Real-World Oral PrEP, the Vaginal Ring, and Injectables Monica Gandhi, 2017, funded
• Assessing the roles of biofilm structure and mechanics in pathogenic, persistent infections Vernita Gordon, 2017, funded
• Intersection of polyomavirus infection and host cellular responses Mengxi Jiang, 2015, funded
• Enhance AAV Liver Transduction with Capsid Immune Evasion Chengwen Li, 2015, funded
• Peptide Autoinducers of Staphylococcal Pathogenicity Tom Muir, 2016, funded

National Institutes of Health (US) - R03

• Modeling atomic structure of the EmrE multidrug pump to design inhibitor peptides Martin Karplus, 2014, funded
• Forward genetics-based discovery of Histoplasma virulence genes Chad A. Rappleye, 2013, funded

National Institutes of Health (US) - R15

• Development of a Novel Inhibitor of Ricin: A Potential Therapeutic Lead against Deadly Shiga and Related Toxins Artem Domashevskiy, 2016, funded
• Elucidating the evolution of Coxiella to uncover critical metabolic pathways Rahul Raghava, 2016, funded

National Institutes of Health (US) - R21

• Mechanisms of enteric Burkholderia psuedomallei infection Steven W. Dow, 2010, funded
• Human immune system layering and the neonatal response to vaccines Joseph M. McCune, 2010, funded
• Ribosome profiling of Trypanosoma brucei Peter John Myler, 2010, funded
• Lymphoid signals for stromal growth and organization in the thymus. Howard T. Petrie, 2011, funded
• Alteration of host protein stability by Legionella Michael N. Starnbach, 2011, funded

National Institutes of Health (US) - R21 (PA-10-069)

• Graph-based clinical diagnosis and prediction using multi-modal neuroimaging data Arno Klein, 2016, unfunded

National Institutes of Health (US) - R21/R33

• The semen enhancer of HIV infection as a novel microbicide target Stephen Dewhurst, 2010, funded

National Institutes of Health (US) - R41, R42, R43, R44

• High-throughput, multiplexed characterization and modeling of antibody:antigen binding, with application to HSV Benjamin Delbert Brooks, 2016, funded
• Antibiotics for Recalcitrant Infection Kenneth Coleman, 2014, funded
• Novel indication for myeloid progenitor use: Induction of tolerance Timothy C. Fong, 2013, funded
• Broadly protective (universal) virus-like particle (VLP) based influenza vaccine Jose M. Galarza, 2013, funded
• Rapid Test for Recent HIV Infection Patricia Garrett, 2014, funded
• Antigen Detection assay for the Diagnosis of Melioidosis Raymond Houghton, 2014, funded
• Experimental Gonococcal Vaccine Yingru Liu, 2016, funded
• Point-of-Care HIV Antigen/Antibody Diagnostic Device Michael J. Lochhead, 2013, funded
• Rapid, automated, detection of viral and bacterial pathogens causing meningitis Mark Poritz, 2016, funded
• Lead Compound Discovery from Engineered Analogs of Occidiofungin James Smith, 2016, funded
• Developing a small peptide to control autoimmune inflammation in type 1 diabetes David H. Wagner, 2016, funded

National Institutes of Health (US) - Ruth L. Kirschstein National Research Service Award (NRSA) Individual Predoctoral Fellowship

• Neural Systems for Infant Sensitivity to Phonological Rhythmic-Temporal Patterning Adam Stone, 2016, funded

National Institutes of Health (US) - unsolicited R21

• Concurrence Topology: Finding High-Order Dependence in Neuropsychiatric Data Arno Klein, 2013, unfunded

National Institutes of Health - NIGMS

• International Clinics on Infectious Disease Dynamics and Data Juliet R.C. Pulliam, 2012, funded

National Institutes of Health, Department of Health and Human Services (US) - IR-ORI-16-001 by the Office of Research Integrity

• The value of statistical tools to detect data fabrication Chris HJ Hartgerink, 2016,

Netherlands eScience Center (NLeSC) - Accelerating Scientific Discovery (ASDI)

• eEcoLiDAR, eScience infrastructure for ecological applications of LiDAR point clouds: reconstructing the 3D ecosystem structure for animals at regional to continental scales W. Daniel Kissling, 2017, funded

New Széchenyi Plan (ÚSZT) [Hungarian] - National Excellence Program

• Tools of Persuasion in Visual Advertisements at Maltese Sites of Cultural Tourism: A Social Science Analysis János Tóth, 2012, funded

Prairie Biotic Research, Inc. - (N/A)

• Pollinator communities of crop and wild sunflowers Scott Chamberlain, 2010, funded

Shuttleworth Foundation - Shuttleworth Foundation Fellowship Program

• Shuttleworth Fellowship Application Donat Agosti, 2016, unfunded
• Shuttleworth Fellowship Application Mad Price Ball, 2017, funded

Texas Higher Education Coordinating Board - Norman Hackerman Advanced Research Program

• Ecological and evolutionary impacts of pollinator sharing between cultivated and wild sunflowers Scott Chamberlain, 2009, unfunded

The Hungarian Diaspora Council (Nemzeti Regiszter) - Mikes Kelemen Program

• Historical analysis of strategies for assimilation and identity maintenance in dispersed groups of overseas Hungarians and their relevance regarding national policy planning János Tóth, 2015, unfunded

The Wellcome Trust - The Open Science Prize

• ContentMine/Hypothes.is Proposal Peter Murray-Rust, 2016, unfunded
• Open Neuroimaging Laboratory Amy Robinson and Roberto Toro, 2016, partially funded
• Roadmap: A Research Data Management Advisory Platform Stephanie Simms, 2016, unfunded
• SCINDR - The SCience INtroDuction Robot that will Connect Open Scientists Chase Smith, 2016, unfunded
• Paperity Central: An Open Catalog of All Scholarly Literature Marcin Wojnarski, 2016, unfunded

Tzu Chi University College of Medicine, Taiwan - Cardiovascular Research

• Clinical roles of soluble ST2 for the outcomes of cardiac valve operations Robert Jeenchen Chen, 2016,

Tzuchi University College of Medicine - PhD Project proposal

• Bi-directional immuno-modulation by Matrix Metalloproteinase-7 (MMP-7) and A Disintegrin And Metalloproteinase-17 (ADAM-17) as transplantation rejection-tolerance spectrum Robert Jeenchen Chen, 2016,

USDA - (N/A)

• Web tools for next-gen sequence analysis C. Titus Brown, 2009, funded

USDA - NIFA

• Scanning for yield: high-throughput discovery of candidate agronomic loci for marker-assisted selection in maize Jeff Ross-Ibarra, 2009, funded

USGS - (N/A)

• Ariel Appleton Research Fellowship Proposal - Ecological Networks Scott Chamberlain, , unfunded

Universidad Nacional de General Sarmiento - (N/A)

• Redes de interacciones ecológicas, la influencia del cambio global y la degradación del hábitat Leonardo A. Saravia, 2019, funded

University of California Natural Reserve System - Mildred E. Mathias Graduate Student Research Grant Program

• Mathias Graduate Student Research Grant William K. Petry, 2014, funded

University of Melbourne - (N/A)

• Genomic tools to study coral reef resilience Heroen Verbruggen, 2012, funded

University of Melbourne and FAPESP - FAPESP/UOM SPRINT grant

• Marine genomics: Genome biology and evolution of key primary producers Heroen Verbruggen, 2015, funded

WWF - Kathryn Fuller Doctoral Fellowship

• Kathryn Fuller Doctoral Fellowship Proposal Scott Chamberlain, , unfunded

Wellcome Trust - Open Research Fund

• Open, complete, disambiguated database of authorship metadata in biomedicine Heather Piwowar and Jason Priem, 2018, tbd

Wenner-Gren Foundation - Dissertation Fieldwork Grant

• A novel experimentally-based investigation of Plio-Pleistocene fossil hominin footprints Kevin G. Hatala, 2012, funded